Tokyo itinerary check in December

My partner, and I will be spending about 7 days in Japan in Dec. I know this is a lot of time so we decided to just focus our trip to seeing sights around Tokyo. I would love to hear your input!
What will the weather be like in mid December.
Any night markets recommendations?
We want to focus on 1-2 areas of Tokyo each day and not overwhelm ourselves with seeing everything, rather just picking an area and seeing where the day takes us.
Our only must dos are: Tokyo national museum, Pokémon Cafe, and a couple onsen experiences.
I would like to catch a kabuki performance or any interesting shows if anyone has any recommendations.
Is seeing all 3 observation towers necessary? If so, what would your top choice.
Is seeing both of the fish markets worth it?
I would love your honest reviews of anything of the items posted.

Thanks!

Day 1:
Check in Hotel in Shinjuku
Walk around Shinjuku evening:
Golden Gai
Kabuchiko
Omoide Yokocho

Day 2: Ueno, Akihabara
Tokyo National museum
Umeyoko shopping st
Akihabara Electric town

Day 3: Tokyo Bay, Ginza
Tsukiji market
(Toyosu fish market)
TeamLabs planets – morning reservation
Toyosu Manyo club- onsen/buffet
Flagship Uniqlo, Muji
Pokemon Cafe
Tokyo character st

Day 4: Asakusa
Nakamise dori st
Senso Ji temple
Tokyo Skytree (sunset)

Day 5: Harajuku/Azubudai Hills
Meiji Jingu
Takeshita St
Azabudai Hills/TeamLab Borderless
Tokyo Tower

Day 6: Tues: Shibuya
Shibuya Sky
Shibuya 109
Shibuya Parco

Day 7: Shinjuku
Shinjuku Gyoen National Garden
Thermae-Yu onsen
Take train to airport

by West_Charity_4586

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